Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm1Q8VC85 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Mir6977-201ENSMUST00000184960 64 ntBASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.34□□□□□ -0.43
Lsm1Q8VC85 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm1Q8VC85 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Lsm1Q8VC85 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Lsm1Q8VC85 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.33□□□□□ -0.43
Lsm1Q8VC85 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm1Q8VC85 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms