Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps39Q8R5L3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.9□□□□□ -0.35
Vps39Q8R5L3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Vps39Q8R5L3 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Vps39Q8R5L3 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Vps39Q8R5L3 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.89□□□□□ -0.35
Vps39Q8R5L3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Gm38671-201ENSMUST00000200573 130 ntBASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vps39Q8R5L3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Gm28911-201ENSMUST00000188837 117 ntBASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Vps39Q8R5L3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.87□□□□□ -0.35
Vps39Q8R5L3 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms