Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cdt1Q8R4E9 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdt1Q8R4E9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Gm4271-201ENSMUST00000174444 973 ntBASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Cts7-204ENSMUST00000225321 1257 ntBASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.5□□□□□ -0.41
Cdt1Q8R4E9 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms