Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Slf1Q8R3P9 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Gm8927-201ENSMUST00000181978 981 ntBASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Mir6956-201ENSMUST00000183598 62 ntBASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Gm9063-201ENSMUST00000223299 582 ntBASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Gm3222-201ENSMUST00000071282 990 ntBASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Gm5859-201ENSMUST00000165401 2324 ntBASIC13.01□□□□□ -0.33
Slf1Q8R3P9 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Slf1Q8R3P9 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Slf1Q8R3P9 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13□□□□□ -0.33
Slf1Q8R3P9 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Gm8798-201ENSMUST00000211877 1661 ntBASIC13□□□□□ -0.33
Slf1Q8R3P9 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Gm13385-201ENSMUST00000121089 220 ntBASIC13□□□□□ -0.33
Slf1Q8R3P9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Slf1Q8R3P9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13□□□□□ -0.33
Slf1Q8R3P9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13□□□□□ -0.33
Slf1Q8R3P9 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13□□□□□ -0.33
Slf1Q8R3P9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13□□□□□ -0.33
Slf1Q8R3P9 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Slf1Q8R3P9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13□□□□□ -0.33
Slf1Q8R3P9 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
Slf1Q8R3P9 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Slf1Q8R3P9 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13□□□□□ -0.33
Slf1Q8R3P9 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms