Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
H2afjQ8R1M2 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Gm6218-201ENSMUST00000219812 628 ntBASIC11.97□□□□□ -0.49
H2afjQ8R1M2 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.97□□□□□ -0.49
H2afjQ8R1M2 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
H2afjQ8R1M2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Gm22189-201ENSMUST00000103822 86 ntBASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Gm44855-201ENSMUST00000205725 362 ntBASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
H2afjQ8R1M2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
H2afjQ8R1M2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
H2afjQ8R1M2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
H2afjQ8R1M2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
H2afjQ8R1M2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
H2afjQ8R1M2 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.96□□□□□ -0.5
H2afjQ8R1M2 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
H2afjQ8R1M2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afjQ8R1M2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afjQ8R1M2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afjQ8R1M2 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afjQ8R1M2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afjQ8R1M2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afjQ8R1M2 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
H2afjQ8R1M2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
H2afjQ8R1M2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afjQ8R1M2 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afjQ8R1M2 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
H2afjQ8R1M2 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
H2afjQ8R1M2 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms