Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atf7Q8R0S1 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Atf7Q8R0S1 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.19■□□□□ 0.02
Atf7Q8R0S1 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Atf7Q8R0S1 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.19■□□□□ 0.02
Atf7Q8R0S1 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Atf7Q8R0S1 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Atf7Q8R0S1 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Atf7Q8R0S1 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atf7Q8R0S1 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.19■□□□□ 0.02
Atf7Q8R0S1 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atf7Q8R0S1 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Atf7Q8R0S1 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atf7Q8R0S1 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atf7Q8R0S1 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Atf7Q8R0S1 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atf7Q8R0S1 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Gm7029-201ENSMUST00000173226 450 ntBASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Gm23363-201ENSMUST00000175024 79 ntBASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atf7Q8R0S1 AC154262.2-202ENSMUST00000225158 1331 ntBASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Gm4768-201ENSMUST00000206199 686 ntBASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Gm19163-201ENSMUST00000223313 780 ntBASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atf7Q8R0S1 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atf7Q8R0S1 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atf7Q8R0S1 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atf7Q8R0S1 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.16■□□□□ 0.02
Atf7Q8R0S1 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Atf7Q8R0S1 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atf7Q8R0S1 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atf7Q8R0S1 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Atf7Q8R0S1 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atf7Q8R0S1 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atf7Q8R0S1 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.16■□□□□ 0.02
Atf7Q8R0S1 Gm11424-201ENSMUST00000121929 829 ntBASIC15.16■□□□□ 0.02
Atf7Q8R0S1 Gm12363-201ENSMUST00000122250 668 ntBASIC15.16■□□□□ 0.02
Atf7Q8R0S1 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atf7Q8R0S1 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.16■□□□□ 0.02
Atf7Q8R0S1 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Atf7Q8R0S1 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms