Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Gm16296-201ENSMUST00000159905 325 ntBASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Gm3793-201ENSMUST00000204973 672 ntBASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Gm9129-201ENSMUST00000218173 1689 ntBASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Gm14150-201ENSMUST00000122404 1354 ntBASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx54Q8K4L0 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 AC169511.2-201ENSMUST00000226674 2063 ntBASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 Mup-ps26-201ENSMUST00000121751 202 ntBASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 Mir7686-201ENSMUST00000200604 57 ntBASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 AC165260.3-202ENSMUST00000224550 1031 ntBASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 AC171241.1-201ENSMUST00000228144 1166 ntBASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 Gm6781-201ENSMUST00000038304 1242 ntBASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ddx54Q8K4L0 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Gm18626-201ENSMUST00000221512 1409 ntBASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Gm5466-201ENSMUST00000119395 1890 ntBASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Gm13315-201ENSMUST00000120376 991 ntBASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Gm12196-201ENSMUST00000120954 262 ntBASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Gm12628-201ENSMUST00000122193 382 ntBASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Gm6771-201ENSMUST00000182716 1001 ntBASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Gm4482-201ENSMUST00000200876 742 ntBASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 AC154184.3-201ENSMUST00000225620 1090 ntBASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Snora73b-201ENSMUST00000083419 205 ntBASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ddx54Q8K4L0 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Gm22133-201ENSMUST00000102082 109 ntBASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC16.71■□□□□ 0.27
Ddx54Q8K4L0 H2-Q3-201ENSMUST00000172583 608 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms