Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ebf4Q8K4J2 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ebf4Q8K4J2 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ebf4Q8K4J2 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ebf4Q8K4J2 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ebf4Q8K4J2 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ebf4Q8K4J2 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Ebf4Q8K4J2 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ebf4Q8K4J2 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ebf4Q8K4J2 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ebf4Q8K4J2 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ebf4Q8K4J2 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ebf4Q8K4J2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Ebf4Q8K4J2 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ebf4Q8K4J2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Gm9229-201ENSMUST00000222777 126 ntBASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ebf4Q8K4J2 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Gm14494-201ENSMUST00000118786 435 ntBASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Gm18889-201ENSMUST00000174284 929 ntBASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Gm45683-201ENSMUST00000210825 1247 ntBASIC11.69□□□□□ -0.54
Ebf4Q8K4J2 Shd-206ENSMUST00000225145 998 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms