Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
ShfQ8CG80 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.47□□□□□ -0.57
ShfQ8CG80 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.47□□□□□ -0.57
ShfQ8CG80 Gm19184-201ENSMUST00000196798 928 ntBASIC11.47□□□□□ -0.57
ShfQ8CG80 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.47□□□□□ -0.57
ShfQ8CG80 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
ShfQ8CG80 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.47□□□□□ -0.57
ShfQ8CG80 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.47□□□□□ -0.57
ShfQ8CG80 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
ShfQ8CG80 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
ShfQ8CG80 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
ShfQ8CG80 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ShfQ8CG80 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ShfQ8CG80 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ShfQ8CG80 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ShfQ8CG80 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.46□□□□□ -0.57
ShfQ8CG80 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ShfQ8CG80 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ShfQ8CG80 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ShfQ8CG80 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ShfQ8CG80 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
ShfQ8CG80 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
ShfQ8CG80 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ShfQ8CG80 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
ShfQ8CG80 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.46□□□□□ -0.57
ShfQ8CG80 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.46□□□□□ -0.57
ShfQ8CG80 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.46□□□□□ -0.57
ShfQ8CG80 Gm14057-201ENSMUST00000120631 482 ntBASIC11.46□□□□□ -0.57
ShfQ8CG80 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.46□□□□□ -0.57
ShfQ8CG80 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ShfQ8CG80 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.46□□□□□ -0.57
ShfQ8CG80 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.46□□□□□ -0.57
ShfQ8CG80 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.46□□□□□ -0.57
ShfQ8CG80 Gm37917-201ENSMUST00000194711 392 ntBASIC11.46□□□□□ -0.57
ShfQ8CG80 Gm44855-201ENSMUST00000205725 362 ntBASIC11.46□□□□□ -0.57
ShfQ8CG80 Gm18624-201ENSMUST00000220966 658 ntBASIC11.46□□□□□ -0.57
ShfQ8CG80 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
ShfQ8CG80 Mir339-201ENSMUST00000083659 96 ntBASIC11.46□□□□□ -0.57
ShfQ8CG80 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.46□□□□□ -0.57
ShfQ8CG80 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ShfQ8CG80 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ShfQ8CG80 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ShfQ8CG80 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
ShfQ8CG80 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ShfQ8CG80 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
ShfQ8CG80 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.46□□□□□ -0.58
ShfQ8CG80 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ShfQ8CG80 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
ShfQ8CG80 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
ShfQ8CG80 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ShfQ8CG80 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
ShfQ8CG80 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
ShfQ8CG80 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.46□□□□□ -0.58
ShfQ8CG80 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
ShfQ8CG80 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.45□□□□□ -0.58
ShfQ8CG80 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
ShfQ8CG80 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ShfQ8CG80 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ShfQ8CG80 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
ShfQ8CG80 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ShfQ8CG80 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ShfQ8CG80 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ShfQ8CG80 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.45□□□□□ -0.58
ShfQ8CG80 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ShfQ8CG80 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.45□□□□□ -0.58
ShfQ8CG80 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ShfQ8CG80 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ShfQ8CG80 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ShfQ8CG80 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
ShfQ8CG80 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ShfQ8CG80 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ShfQ8CG80 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.45□□□□□ -0.58
ShfQ8CG80 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
ShfQ8CG80 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.45□□□□□ -0.58
ShfQ8CG80 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
ShfQ8CG80 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ShfQ8CG80 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ShfQ8CG80 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
ShfQ8CG80 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms