Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Gm14767-201ENSMUST00000121559 586 ntBASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 AW822252-206ENSMUST00000208904 237 ntBASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc28bQ8CEG5 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc28bQ8CEG5 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms