Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc87Q8CDL9 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc87Q8CDL9 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.68□□□□□ -0.22
Ccdc87Q8CDL9 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ccdc87Q8CDL9 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ccdc87Q8CDL9 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Gm11524-201ENSMUST00000119349 807 ntBASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Gm29608-201ENSMUST00000190444 463 ntBASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Gm19078-201ENSMUST00000206311 727 ntBASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ccdc87Q8CDL9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Matn2-203ENSMUST00000226766 3252 ntBASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Gm12138-201ENSMUST00000122180 951 ntBASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.66□□□□□ -0.22
Ccdc87Q8CDL9 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Mir7654-201ENSMUST00000185082 70 ntBASIC13.65□□□□□ -0.22
Ccdc87Q8CDL9 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms