Protein–RNA interactions for Protein: Q8CCJ3

Ufl1, E3 UFM1-protein ligase 1, mousemouse

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufl1Q8CCJ3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 Gm13813-201ENSMUST00000120998 787 ntBASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 Gm12715-201ENSMUST00000121430 1128 ntBASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 CT485787.1-201ENSMUST00000225617 968 ntBASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ufl1Q8CCJ3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Gm12058-201ENSMUST00000118614 437 ntBASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Gm8908-201ENSMUST00000121633 1024 ntBASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Gm25043-201ENSMUST00000158604 212 ntBASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Gm4819-201ENSMUST00000182170 1009 ntBASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Gm29199-201ENSMUST00000187766 775 ntBASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Gm18615-201ENSMUST00000222919 1031 ntBASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ufl1Q8CCJ3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 CT573034.1-201ENSMUST00000222983 313 ntBASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ufl1Q8CCJ3 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms