Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
E4f1Q8CCE9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
E4f1Q8CCE9 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
E4f1Q8CCE9 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
E4f1Q8CCE9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
E4f1Q8CCE9 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
E4f1Q8CCE9 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
E4f1Q8CCE9 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
E4f1Q8CCE9 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.16■□□□□ 0.02
E4f1Q8CCE9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
E4f1Q8CCE9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Rubie-203ENSMUST00000227803 2430 ntBASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Matn2-203ENSMUST00000226766 3252 ntBASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Gm29396-201ENSMUST00000185659 716 ntBASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
E4f1Q8CCE9 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Zfp125-201ENSMUST00000079237 2488 ntBASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Gm18827-201ENSMUST00000188341 790 ntBASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.14■□□□□ 0.01
E4f1Q8CCE9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
E4f1Q8CCE9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
E4f1Q8CCE9 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
E4f1Q8CCE9 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.13■□□□□ 0.01
E4f1Q8CCE9 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
E4f1Q8CCE9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
E4f1Q8CCE9 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
E4f1Q8CCE9 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
E4f1Q8CCE9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
E4f1Q8CCE9 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
E4f1Q8CCE9 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
E4f1Q8CCE9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
E4f1Q8CCE9 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
E4f1Q8CCE9 Gm13786-201ENSMUST00000122371 333 ntBASIC15.13■□□□□ 0.01
E4f1Q8CCE9 Gm2231-201ENSMUST00000125661 612 ntBASIC15.13■□□□□ 0.01
E4f1Q8CCE9 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.13■□□□□ 0.01
E4f1Q8CCE9 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
E4f1Q8CCE9 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
E4f1Q8CCE9 Mir3102-201ENSMUST00000175555 104 ntBASIC15.13■□□□□ 0.01
E4f1Q8CCE9 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.13■□□□□ 0.01
E4f1Q8CCE9 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.13■□□□□ 0.01
E4f1Q8CCE9 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.13■□□□□ 0.01
E4f1Q8CCE9 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms