Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm33320-201ENSMUST00000192232 530 ntBASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tsen54Q8C2A2 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Gm12151-201ENSMUST00000121374 290 ntBASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Mir7221-201ENSMUST00000184009 72 ntBASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Gm45667-201ENSMUST00000210380 1316 ntBASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Tsen54Q8C2A2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms