Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Gm8602-201ENSMUST00000184045 607 ntBASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Gm27892-201ENSMUST00000185017 106 ntBASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Gm44397-201ENSMUST00000195950 113 ntBASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Gm26315-201ENSMUST00000083890 321 ntBASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Gm44913-201ENSMUST00000208060 2990 ntBASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trerf1Q8BXJ2 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Gm12928-201ENSMUST00000117115 573 ntBASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Gm43433-201ENSMUST00000196573 481 ntBASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Gm17794-201ENSMUST00000220252 955 ntBASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.63□□□□□ -0.23
Trerf1Q8BXJ2 Gm10110-202ENSMUST00000228705 3220 ntBASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Gm6244-201ENSMUST00000178732 841 ntBASIC13.62□□□□□ -0.23
Trerf1Q8BXJ2 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms