Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Gm13226-201ENSMUST00000117838 404 ntBASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Gm11803-201ENSMUST00000119966 444 ntBASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.48□□□□□ -0.57
Ube3dQ8BX13 AC132446.1-201ENSMUST00000222655 226 ntBASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ube3dQ8BX13 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Gm5687-201ENSMUST00000118252 640 ntBASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Gm24644-201ENSMUST00000157114 139 ntBASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Gm22119-201ENSMUST00000175594 99 ntBASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Gm45784-201ENSMUST00000188360 142 ntBASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Gm6991-201ENSMUST00000218475 1178 ntBASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Gm8598-201ENSMUST00000221184 836 ntBASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ube3dQ8BX13 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.47□□□□□ -0.57
Ube3dQ8BX13 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ube3dQ8BX13 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ube3dQ8BX13 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ube3dQ8BX13 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ube3dQ8BX13 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ube3dQ8BX13 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ube3dQ8BX13 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ube3dQ8BX13 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ube3dQ8BX13 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ube3dQ8BX13 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ube3dQ8BX13 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ube3dQ8BX13 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms