Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.38□□□□□ -0.59
SprnQ8BWU1 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.38□□□□□ -0.59
SprnQ8BWU1 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.37□□□□□ -0.59
SprnQ8BWU1 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.37□□□□□ -0.59
SprnQ8BWU1 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.37□□□□□ -0.59
SprnQ8BWU1 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Gm6745-201ENSMUST00000199216 526 ntBASIC11.37□□□□□ -0.59
SprnQ8BWU1 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.37□□□□□ -0.59
SprnQ8BWU1 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
SprnQ8BWU1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.36□□□□□ -0.59
SprnQ8BWU1 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.36□□□□□ -0.59
SprnQ8BWU1 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Gm9797-201ENSMUST00000052902 613 ntBASIC11.36□□□□□ -0.59
SprnQ8BWU1 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Gm6180-201ENSMUST00000065243 498 ntBASIC11.36□□□□□ -0.59
SprnQ8BWU1 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms