Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm10434-201ENSMUST00000101158 471 ntBASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm12502-201ENSMUST00000120197 444 ntBASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm13297-201ENSMUST00000120205 934 ntBASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm12291-201ENSMUST00000121627 311 ntBASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm8227-201ENSMUST00000223306 571 ntBASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap1Q8BTW8 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm15370-201ENSMUST00000117158 253 ntBASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm13492-201ENSMUST00000119772 665 ntBASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm7783-201ENSMUST00000204795 781 ntBASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap1Q8BTW8 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Cdk5rap1Q8BTW8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms