Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Gm38158-201ENSMUST00000194617 339 ntBASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Gm42627-201ENSMUST00000197347 224 ntBASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Gm6013-201ENSMUST00000212264 699 ntBASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Gm24526-201ENSMUST00000082921 158 ntBASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nup54Q8BTS4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Mir1938-201ENSMUST00000158746 100 ntBASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Nup54Q8BTS4 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Gm6023-201ENSMUST00000118217 606 ntBASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Gm11793-201ENSMUST00000120433 981 ntBASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Gm16296-201ENSMUST00000159905 325 ntBASIC13.15□□□□□ -0.3
Nup54Q8BTS4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Gm7399-201ENSMUST00000032395 858 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms