Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 AC108416.1-202ENSMUST00000228927 1201 ntBASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Gm12783-201ENSMUST00000121425 397 ntBASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Gm26989-201ENSMUST00000182608 749 ntBASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Gm37458-201ENSMUST00000194055 410 ntBASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Gm45594-201ENSMUST00000211717 241 ntBASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Gm25881-201ENSMUST00000157783 103 ntBASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Smg1Q8BKX6 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.71
Smg1Q8BKX6 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Gm9166-201ENSMUST00000120293 561 ntBASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Gm7985-201ENSMUST00000183329 981 ntBASIC10.58□□□□□ -0.72
Smg1Q8BKX6 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Smg1Q8BKX6 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Gm12516-201ENSMUST00000120819 385 ntBASIC10.57□□□□□ -0.72
Smg1Q8BKX6 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Gm4726-201ENSMUST00000135604 736 ntBASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Gm6019-201ENSMUST00000148369 736 ntBASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms