Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
SynbQ8BI41 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SynbQ8BI41 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.34□□□□□ -0.43
SynbQ8BI41 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.34□□□□□ -0.43
SynbQ8BI41 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SynbQ8BI41 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SynbQ8BI41 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SynbQ8BI41 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.34□□□□□ -0.43
SynbQ8BI41 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.33□□□□□ -0.43
SynbQ8BI41 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.33□□□□□ -0.44
SynbQ8BI41 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
SynbQ8BI41 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.33□□□□□ -0.44
SynbQ8BI41 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.33□□□□□ -0.44
SynbQ8BI41 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.33□□□□□ -0.44
SynbQ8BI41 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.33□□□□□ -0.44
SynbQ8BI41 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
SynbQ8BI41 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SynbQ8BI41 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SynbQ8BI41 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SynbQ8BI41 Gm26083-201ENSMUST00000157904 193 ntBASIC12.33□□□□□ -0.44
SynbQ8BI41 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.33□□□□□ -0.44
SynbQ8BI41 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.33□□□□□ -0.44
SynbQ8BI41 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.33□□□□□ -0.44
SynbQ8BI41 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.33□□□□□ -0.44
SynbQ8BI41 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SynbQ8BI41 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SynbQ8BI41 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
SynbQ8BI41 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.33□□□□□ -0.44
SynbQ8BI41 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.33□□□□□ -0.44
SynbQ8BI41 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.33□□□□□ -0.44
SynbQ8BI41 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SynbQ8BI41 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.33□□□□□ -0.44
SynbQ8BI41 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SynbQ8BI41 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SynbQ8BI41 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SynbQ8BI41 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.32□□□□□ -0.44
SynbQ8BI41 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.32□□□□□ -0.44
SynbQ8BI41 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SynbQ8BI41 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SynbQ8BI41 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SynbQ8BI41 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SynbQ8BI41 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SynbQ8BI41 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.32□□□□□ -0.44
SynbQ8BI41 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SynbQ8BI41 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SynbQ8BI41 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SynbQ8BI41 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
SynbQ8BI41 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SynbQ8BI41 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
SynbQ8BI41 Gm25261-201ENSMUST00000157416 134 ntBASIC12.32□□□□□ -0.44
SynbQ8BI41 Gm16570-201ENSMUST00000161951 436 ntBASIC12.32□□□□□ -0.44
SynbQ8BI41 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.32□□□□□ -0.44
SynbQ8BI41 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SynbQ8BI41 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.32□□□□□ -0.44
SynbQ8BI41 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.32□□□□□ -0.44
SynbQ8BI41 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SynbQ8BI41 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SynbQ8BI41 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
SynbQ8BI41 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.32□□□□□ -0.44
SynbQ8BI41 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SynbQ8BI41 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SynbQ8BI41 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SynbQ8BI41 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.32□□□□□ -0.44
SynbQ8BI41 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SynbQ8BI41 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
SynbQ8BI41 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SynbQ8BI41 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SynbQ8BI41 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SynbQ8BI41 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SynbQ8BI41 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.31□□□□□ -0.44
SynbQ8BI41 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SynbQ8BI41 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SynbQ8BI41 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SynbQ8BI41 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SynbQ8BI41 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SynbQ8BI41 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SynbQ8BI41 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms