Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Rnf38Q8BI21 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.46□□□□□ -0.41
Rnf38Q8BI21 Gm19220-201ENSMUST00000222682 803 ntBASIC12.46□□□□□ -0.41
Rnf38Q8BI21 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf38Q8BI21 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Rnf38Q8BI21 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf38Q8BI21 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf38Q8BI21 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf38Q8BI21 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rnf38Q8BI21 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.46□□□□□ -0.42
Rnf38Q8BI21 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rnf38Q8BI21 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rnf38Q8BI21 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rnf38Q8BI21 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.42
Rnf38Q8BI21 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.42
Rnf38Q8BI21 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rnf38Q8BI21 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rnf38Q8BI21 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.46□□□□□ -0.42
Rnf38Q8BI21 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Gm14350-201ENSMUST00000116642 640 ntBASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Gm12859-201ENSMUST00000117834 427 ntBASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Gm38223-201ENSMUST00000194484 695 ntBASIC12.45□□□□□ -0.42
Rnf38Q8BI21 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rnf38Q8BI21 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Rnf38Q8BI21 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms