Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim62Q80V85 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.32□□□□□ -0.28
Trim62Q80V85 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim62Q80V85 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim62Q80V85 Gm5187-201ENSMUST00000117317 991 ntBASIC13.32□□□□□ -0.28
Trim62Q80V85 Gm11591-201ENSMUST00000120063 702 ntBASIC13.32□□□□□ -0.28
Trim62Q80V85 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim62Q80V85 Gm37008-201ENSMUST00000195712 319 ntBASIC13.32□□□□□ -0.28
Trim62Q80V85 Gm19184-201ENSMUST00000196798 928 ntBASIC13.32□□□□□ -0.28
Trim62Q80V85 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim62Q80V85 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim62Q80V85 Grk6-205ENSMUST00000224653 2976 ntBASIC13.32□□□□□ -0.28
Trim62Q80V85 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.32□□□□□ -0.28
Trim62Q80V85 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim62Q80V85 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim62Q80V85 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim62Q80V85 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim62Q80V85 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim62Q80V85 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim62Q80V85 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim62Q80V85 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim62Q80V85 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.32□□□□□ -0.28
Trim62Q80V85 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim62Q80V85 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim62Q80V85 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim62Q80V85 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.32□□□□□ -0.28
Trim62Q80V85 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim62Q80V85 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim62Q80V85 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trim62Q80V85 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Trim62Q80V85 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim62Q80V85 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim62Q80V85 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim62Q80V85 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim62Q80V85 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Trim62Q80V85 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim62Q80V85 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim62Q80V85 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim62Q80V85 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim62Q80V85 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim62Q80V85 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim62Q80V85 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.31□□□□□ -0.28
Trim62Q80V85 Mir1247-201ENSMUST00000116706 82 ntBASIC13.31□□□□□ -0.28
Trim62Q80V85 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.31□□□□□ -0.28
Trim62Q80V85 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.31□□□□□ -0.28
Trim62Q80V85 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.31□□□□□ -0.28
Trim62Q80V85 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim62Q80V85 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim62Q80V85 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.31□□□□□ -0.28
Trim62Q80V85 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim62Q80V85 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.31□□□□□ -0.28
Trim62Q80V85 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim62Q80V85 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim62Q80V85 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim62Q80V85 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim62Q80V85 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim62Q80V85 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.31□□□□□ -0.28
Trim62Q80V85 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim62Q80V85 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim62Q80V85 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim62Q80V85 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim62Q80V85 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
Trim62Q80V85 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trim62Q80V85 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.3□□□□□ -0.28
Trim62Q80V85 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.3□□□□□ -0.28
Trim62Q80V85 Gm7809-201ENSMUST00000153199 742 ntBASIC13.3□□□□□ -0.28
Trim62Q80V85 Gm24548-201ENSMUST00000158650 108 ntBASIC13.3□□□□□ -0.28
Trim62Q80V85 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Gm42627-201ENSMUST00000197347 224 ntBASIC13.3□□□□□ -0.28
Trim62Q80V85 Gm5904-201ENSMUST00000210286 865 ntBASIC13.3□□□□□ -0.28
Trim62Q80V85 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.3□□□□□ -0.28
Trim62Q80V85 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim62Q80V85 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim62Q80V85 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.3□□□□□ -0.28
Trim62Q80V85 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim62Q80V85 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.3□□□□□ -0.28
Trim62Q80V85 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms