Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Usp8Q80U87 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.94□□□□□ -0.34
Usp8Q80U87 Gm12341-201ENSMUST00000119724 503 ntBASIC12.94□□□□□ -0.34
Usp8Q80U87 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.94□□□□□ -0.34
Usp8Q80U87 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.94□□□□□ -0.34
Usp8Q80U87 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.94□□□□□ -0.34
Usp8Q80U87 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.94□□□□□ -0.34
Usp8Q80U87 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Auts2-212ENSMUST00000178555 309 ntBASIC12.94□□□□□ -0.34
Usp8Q80U87 Gm18307-201ENSMUST00000206864 949 ntBASIC12.94□□□□□ -0.34
Usp8Q80U87 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.94□□□□□ -0.34
Usp8Q80U87 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.94□□□□□ -0.34
Usp8Q80U87 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Usp8Q80U87 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.94□□□□□ -0.34
Usp8Q80U87 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Usp8Q80U87 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp8Q80U87 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Usp8Q80U87 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Usp8Q80U87 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Usp8Q80U87 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp8Q80U87 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp8Q80U87 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Usp8Q80U87 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp8Q80U87 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp8Q80U87 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Usp8Q80U87 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp8Q80U87 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp8Q80U87 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.93□□□□□ -0.34
Usp8Q80U87 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp8Q80U87 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp8Q80U87 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.93□□□□□ -0.34
Usp8Q80U87 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Usp8Q80U87 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.93□□□□□ -0.34
Usp8Q80U87 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.93□□□□□ -0.34
Usp8Q80U87 Mir6977-201ENSMUST00000184960 64 ntBASIC12.93□□□□□ -0.34
Usp8Q80U87 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.93□□□□□ -0.34
Usp8Q80U87 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp8Q80U87 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.93□□□□□ -0.34
Usp8Q80U87 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.93□□□□□ -0.34
Usp8Q80U87 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.93□□□□□ -0.34
Usp8Q80U87 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Usp8Q80U87 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.93□□□□□ -0.34
Usp8Q80U87 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Usp8Q80U87 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.93□□□□□ -0.34
Usp8Q80U87 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp8Q80U87 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp8Q80U87 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp8Q80U87 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Usp8Q80U87 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.93□□□□□ -0.34
Usp8Q80U87 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp8Q80U87 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Usp8Q80U87 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Usp8Q80U87 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.93□□□□□ -0.34
Usp8Q80U87 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp8Q80U87 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.92□□□□□ -0.34
Usp8Q80U87 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp8Q80U87 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp8Q80U87 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp8Q80U87 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Usp8Q80U87 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp8Q80U87 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp8Q80U87 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.92□□□□□ -0.34
Usp8Q80U87 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp8Q80U87 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp8Q80U87 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Usp8Q80U87 Gm27437-201ENSMUST00000183429 107 ntBASIC12.92□□□□□ -0.34
Usp8Q80U87 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp8Q80U87 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp8Q80U87 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.92□□□□□ -0.34
Usp8Q80U87 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.92□□□□□ -0.34
Usp8Q80U87 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.92□□□□□ -0.34
Usp8Q80U87 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp8Q80U87 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Usp8Q80U87 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Usp8Q80U87 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms