Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.09□□□□□ -0.15
Ush1gQ80T11 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.09□□□□□ -0.15
Ush1gQ80T11 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Ush1gQ80T11 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ush1gQ80T11 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ush1gQ80T11 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ush1gQ80T11 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ush1gQ80T11 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Ush1gQ80T11 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.08□□□□□ -0.15
Ush1gQ80T11 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ush1gQ80T11 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.08□□□□□ -0.16
Ush1gQ80T11 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.08□□□□□ -0.16
Ush1gQ80T11 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Gm24830-201ENSMUST00000102024 166 ntBASIC14.08□□□□□ -0.16
Ush1gQ80T11 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.08□□□□□ -0.16
Ush1gQ80T11 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.08□□□□□ -0.16
Ush1gQ80T11 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.08□□□□□ -0.16
Ush1gQ80T11 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Gm25890-201ENSMUST00000177643 165 ntBASIC14.08□□□□□ -0.16
Ush1gQ80T11 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.08□□□□□ -0.16
Ush1gQ80T11 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.08□□□□□ -0.16
Ush1gQ80T11 Gm22614-201ENSMUST00000178300 165 ntBASIC14.08□□□□□ -0.16
Ush1gQ80T11 Gm16505-201ENSMUST00000179981 232 ntBASIC14.08□□□□□ -0.16
Ush1gQ80T11 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.08□□□□□ -0.16
Ush1gQ80T11 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Gm31256-201ENSMUST00000194705 506 ntBASIC14.08□□□□□ -0.16
Ush1gQ80T11 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.08□□□□□ -0.16
Ush1gQ80T11 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Gm30285-201ENSMUST00000214614 422 ntBASIC14.08□□□□□ -0.16
Ush1gQ80T11 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Gm22042-201ENSMUST00000082989 165 ntBASIC14.08□□□□□ -0.16
Ush1gQ80T11 Gm26232-201ENSMUST00000083360 166 ntBASIC14.08□□□□□ -0.16
Ush1gQ80T11 Gm24136-201ENSMUST00000083374 165 ntBASIC14.08□□□□□ -0.16
Ush1gQ80T11 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.08□□□□□ -0.16
Ush1gQ80T11 Gm26110-201ENSMUST00000083971 165 ntBASIC14.08□□□□□ -0.16
Ush1gQ80T11 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ush1gQ80T11 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.07□□□□□ -0.16
Ush1gQ80T11 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ush1gQ80T11 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms