Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Gm14381-201ENSMUST00000122105 414 ntBASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Ubfd1Q78JW9 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ubfd1Q78JW9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Gm24255-201ENSMUST00000104481 128 ntBASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.53□□□□□ -0.4
Ubfd1Q78JW9 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms