Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cspg5Q71M36 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.4□□□□□ -0.27
Cspg5Q71M36 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cspg5Q71M36 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.39□□□□□ -0.27
Cspg5Q71M36 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Gm7809-201ENSMUST00000153199 742 ntBASIC13.39□□□□□ -0.27
Cspg5Q71M36 Gm16379-201ENSMUST00000161469 348 ntBASIC13.39□□□□□ -0.27
Cspg5Q71M36 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Gm20482-202ENSMUST00000174729 825 ntBASIC13.39□□□□□ -0.27
Cspg5Q71M36 Gm26927-201ENSMUST00000182385 965 ntBASIC13.39□□□□□ -0.27
Cspg5Q71M36 Gm8762-201ENSMUST00000193486 339 ntBASIC13.39□□□□□ -0.27
Cspg5Q71M36 Gm43068-201ENSMUST00000201095 1273 ntBASIC13.39□□□□□ -0.27
Cspg5Q71M36 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.39□□□□□ -0.27
Cspg5Q71M36 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Gm8227-201ENSMUST00000223306 571 ntBASIC13.39□□□□□ -0.27
Cspg5Q71M36 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.39□□□□□ -0.27
Cspg5Q71M36 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.39□□□□□ -0.27
Cspg5Q71M36 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cspg5Q71M36 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Gm12176-201ENSMUST00000121420 875 ntBASIC13.38□□□□□ -0.27
Cspg5Q71M36 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.38□□□□□ -0.27
Cspg5Q71M36 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Gm26185-201ENSMUST00000157692 266 ntBASIC13.38□□□□□ -0.27
Cspg5Q71M36 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.38□□□□□ -0.27
Cspg5Q71M36 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Rps4l-202ENSMUST00000204242 789 ntBASIC13.38□□□□□ -0.27
Cspg5Q71M36 Gm5363-201ENSMUST00000211927 938 ntBASIC13.38□□□□□ -0.27
Cspg5Q71M36 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.38□□□□□ -0.27
Cspg5Q71M36 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cspg5Q71M36 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg5Q71M36 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cspg5Q71M36 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg5Q71M36 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg5Q71M36 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg5Q71M36 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg5Q71M36 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.37□□□□□ -0.27
Cspg5Q71M36 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg5Q71M36 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg5Q71M36 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg5Q71M36 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg5Q71M36 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cspg5Q71M36 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms