Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Gm5616-201ENSMUST00000165252 384 ntBASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Gm8741-201ENSMUST00000174736 384 ntBASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ddx55Q6ZPL9 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Gm15711-201ENSMUST00000118889 535 ntBASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Gm13045-201ENSMUST00000119019 712 ntBASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Gm11450-201ENSMUST00000121144 333 ntBASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Gm27627-201ENSMUST00000183644 150 ntBASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
Ddx55Q6ZPL9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Gm13813-201ENSMUST00000120998 787 ntBASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 AC159819.2-201ENSMUST00000216151 342 ntBASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Gm5369-201ENSMUST00000217499 588 ntBASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Ntng1-201ENSMUST00000051253 327 ntBASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ddx55Q6ZPL9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms