Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Gm27627-201ENSMUST00000183644 150 ntBASIC14.91□□□□□ -0.02
Nup98Q6PFD9 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Nup98Q6PFD9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup98Q6PFD9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nup98Q6PFD9 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup98Q6PFD9 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup98Q6PFD9 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nup98Q6PFD9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup98Q6PFD9 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.9□□□□□ -0.02
Nup98Q6PFD9 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.9□□□□□ -0.02
Nup98Q6PFD9 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.9□□□□□ -0.02
Nup98Q6PFD9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Nup98Q6PFD9 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup98Q6PFD9 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Nup98Q6PFD9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup98Q6PFD9 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Nup98Q6PFD9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup98Q6PFD9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup98Q6PFD9 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nup98Q6PFD9 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup98Q6PFD9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup98Q6PFD9 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup98Q6PFD9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nup98Q6PFD9 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Nup98Q6PFD9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup98Q6PFD9 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nup98Q6PFD9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Gm270-201ENSMUST00000223010 976 ntBASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Gm5419-201ENSMUST00000119301 527 ntBASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Gm12266-201ENSMUST00000120311 962 ntBASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Gm12196-201ENSMUST00000120954 262 ntBASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.89□□□□□ -0.03
Nup98Q6PFD9 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms