Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm32999-201ENSMUST00000192693 562 ntBASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 AU022133-201ENSMUST00000200601 873 ntBASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Gm17812-201ENSMUST00000204935 318 ntBASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Spcs1-203ENSMUST00000226374 592 ntBASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Gm14921-201ENSMUST00000118643 908 ntBASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Gm9211-201ENSMUST00000182882 975 ntBASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Snrnp40Q6PE01 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Gm9062-201ENSMUST00000117712 727 ntBASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Gm14832-201ENSMUST00000121289 322 ntBASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Gm24845-201ENSMUST00000158034 109 ntBASIC11.29□□□□□ -0.6
Snrnp40Q6PE01 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms