Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Gm4271-201ENSMUST00000174444 973 ntBASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Gm6458-201ENSMUST00000211573 635 ntBASIC15.03■□□□□ -0
Smarcc2Q6PDG5 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarcc2Q6PDG5 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcc2Q6PDG5 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Smarcc2Q6PDG5 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcc2Q6PDG5 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcc2Q6PDG5 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcc2Q6PDG5 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcc2Q6PDG5 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Smarcc2Q6PDG5 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.02■□□□□ -0
Smarcc2Q6PDG5 Gm12291-201ENSMUST00000121627 311 ntBASIC15.02■□□□□ -0
Smarcc2Q6PDG5 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.02■□□□□ -0
Smarcc2Q6PDG5 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.02■□□□□ -0
Smarcc2Q6PDG5 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.02■□□□□ -0
Smarcc2Q6PDG5 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smarcc2Q6PDG5 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.02■□□□□ -0
Smarcc2Q6PDG5 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
Smarcc2Q6PDG5 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.02■□□□□ -0
Smarcc2Q6PDG5 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.02■□□□□ -0
Smarcc2Q6PDG5 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcc2Q6PDG5 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.02■□□□□ -0
Smarcc2Q6PDG5 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarcc2Q6PDG5 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcc2Q6PDG5 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcc2Q6PDG5 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcc2Q6PDG5 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcc2Q6PDG5 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcc2Q6PDG5 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcc2Q6PDG5 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC15.02□□□□□ -0.01
Smarcc2Q6PDG5 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcc2Q6PDG5 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcc2Q6PDG5 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcc2Q6PDG5 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcc2Q6PDG5 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcc2Q6PDG5 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Smarcc2Q6PDG5 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.02□□□□□ -0.01
Smarcc2Q6PDG5 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Smarcc2Q6PDG5 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 AC123834.1-201ENSMUST00000225346 2043 ntBASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Gm12384-201ENSMUST00000119228 919 ntBASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Gm37497-201ENSMUST00000195830 798 ntBASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Gm43438-201ENSMUST00000198133 379 ntBASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Smarcc2Q6PDG5 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Gm13813-201ENSMUST00000120998 787 ntBASIC15□□□□□ -0.01
Smarcc2Q6PDG5 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms