Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Gm17208-201ENSMUST00000168388 535 ntBASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Gm22121-201ENSMUST00000175148 54 ntBASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Gm27486-201ENSMUST00000184923 80 ntBASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Gm37042-201ENSMUST00000193816 581 ntBASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.41□□□□□ -0.1
Usp49Q6P9L4 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp49Q6P9L4 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Gm13829-201ENSMUST00000119600 138 ntBASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Gm4271-201ENSMUST00000174444 973 ntBASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Gm32025-201ENSMUST00000217960 307 ntBASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp49Q6P9L4 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp49Q6P9L4 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
Usp49Q6P9L4 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Gm16177-201ENSMUST00000120728 718 ntBASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Gm2231-201ENSMUST00000125661 612 ntBASIC14.39□□□□□ -0.11
Usp49Q6P9L4 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp49Q6P9L4 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms