Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smchd1Q6P5D8 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Gm14130-201ENSMUST00000118417 987 ntBASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Gm14208-201ENSMUST00000119645 678 ntBASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Gm13570-201ENSMUST00000140763 309 ntBASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Gm25668-201ENSMUST00000157700 129 ntBASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Gm44967-201ENSMUST00000207047 631 ntBASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Gm4864-201ENSMUST00000219894 1461 ntBASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smchd1Q6P5D8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Gm13665-201ENSMUST00000120830 528 ntBASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Gm16570-201ENSMUST00000161951 436 ntBASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 AA914427-201ENSMUST00000193194 1166 ntBASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smchd1Q6P5D8 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Smchd1Q6P5D8 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms