Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Gm8213-201ENSMUST00000118191 441 ntBASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Gm9794-201ENSMUST00000202370 423 ntBASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sp140Q6NSQ5 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Gm12203-201ENSMUST00000118235 598 ntBASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Gm13369-201ENSMUST00000119442 987 ntBASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Gm12209-201ENSMUST00000120089 596 ntBASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Gm8652-201ENSMUST00000181363 964 ntBASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Gm37922-201ENSMUST00000195596 455 ntBASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Gm10012-201ENSMUST00000078252 192 ntBASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Gm5356-201ENSMUST00000093326 615 ntBASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.05□□□□□ -0.32
Sp140Q6NSQ5 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Gm12490-201ENSMUST00000120255 560 ntBASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Gm13813-201ENSMUST00000120998 787 ntBASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Sp140Q6NSQ5 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms