Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gm12957-201ENSMUST00000117835 377 ntBASIC13.63□□□□□ -0.23
Scube3Q66PY1 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scube3Q66PY1 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.63□□□□□ -0.23
Scube3Q66PY1 Gm37424-201ENSMUST00000191727 561 ntBASIC13.63□□□□□ -0.23
Scube3Q66PY1 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.63□□□□□ -0.23
Scube3Q66PY1 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.63□□□□□ -0.23
Scube3Q66PY1 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scube3Q66PY1 AC165260.5-201ENSMUST00000224640 1247 ntBASIC13.63□□□□□ -0.23
Scube3Q66PY1 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scube3Q66PY1 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scube3Q66PY1 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scube3Q66PY1 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scube3Q66PY1 Snora73a-201ENSMUST00000082453 205 ntBASIC13.63□□□□□ -0.23
Scube3Q66PY1 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scube3Q66PY1 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scube3Q66PY1 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scube3Q66PY1 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scube3Q66PY1 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scube3Q66PY1 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.63□□□□□ -0.23
Scube3Q66PY1 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scube3Q66PY1 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scube3Q66PY1 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scube3Q66PY1 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.63□□□□□ -0.23
Scube3Q66PY1 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.63□□□□□ -0.23
Scube3Q66PY1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.63□□□□□ -0.23
Scube3Q66PY1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scube3Q66PY1 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scube3Q66PY1 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scube3Q66PY1 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scube3Q66PY1 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scube3Q66PY1 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.63□□□□□ -0.23
Scube3Q66PY1 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.63□□□□□ -0.23
Scube3Q66PY1 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
Scube3Q66PY1 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Gm43084-201ENSMUST00000200696 947 ntBASIC13.62□□□□□ -0.23
Scube3Q66PY1 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC13.62□□□□□ -0.23
Scube3Q66PY1 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.62□□□□□ -0.23
Scube3Q66PY1 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Scube3Q66PY1 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scube3Q66PY1 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scube3Q66PY1 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.61□□□□□ -0.23
Scube3Q66PY1 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scube3Q66PY1 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scube3Q66PY1 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scube3Q66PY1 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scube3Q66PY1 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scube3Q66PY1 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scube3Q66PY1 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scube3Q66PY1 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scube3Q66PY1 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scube3Q66PY1 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scube3Q66PY1 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scube3Q66PY1 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scube3Q66PY1 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scube3Q66PY1 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scube3Q66PY1 Gm5187-201ENSMUST00000117317 991 ntBASIC13.61□□□□□ -0.23
Scube3Q66PY1 Gm25261-201ENSMUST00000157416 134 ntBASIC13.61□□□□□ -0.23
Scube3Q66PY1 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC13.61□□□□□ -0.23
Scube3Q66PY1 Gm27514-201ENSMUST00000183692 110 ntBASIC13.61□□□□□ -0.23
Scube3Q66PY1 Gm8502-201ENSMUST00000185708 901 ntBASIC13.61□□□□□ -0.23
Scube3Q66PY1 Gm8510-201ENSMUST00000189202 895 ntBASIC13.61□□□□□ -0.23
Scube3Q66PY1 Gm2316-201ENSMUST00000190613 921 ntBASIC13.61□□□□□ -0.23
Scube3Q66PY1 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Scube3Q66PY1 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.61□□□□□ -0.23
Scube3Q66PY1 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Scube3Q66PY1 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC13.61□□□□□ -0.23
Scube3Q66PY1 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms