Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC11.87□□□□□ -0.51
AtmQ62388 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AtmQ62388 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AtmQ62388 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
AtmQ62388 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.87□□□□□ -0.51
AtmQ62388 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AtmQ62388 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AtmQ62388 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AtmQ62388 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AtmQ62388 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AtmQ62388 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AtmQ62388 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.87□□□□□ -0.51
AtmQ62388 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.87□□□□□ -0.51
AtmQ62388 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
AtmQ62388 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.87□□□□□ -0.51
AtmQ62388 Gm6485-201ENSMUST00000160676 439 ntBASIC11.87□□□□□ -0.51
AtmQ62388 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AtmQ62388 Gm44980-201ENSMUST00000205826 314 ntBASIC11.87□□□□□ -0.51
AtmQ62388 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.87□□□□□ -0.51
AtmQ62388 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
AtmQ62388 Mir339-201ENSMUST00000083659 96 ntBASIC11.87□□□□□ -0.51
AtmQ62388 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AtmQ62388 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AtmQ62388 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
AtmQ62388 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
AtmQ62388 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.86□□□□□ -0.51
AtmQ62388 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
AtmQ62388 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.86□□□□□ -0.51
AtmQ62388 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AtmQ62388 Gm26013-201ENSMUST00000104404 119 ntBASIC11.86□□□□□ -0.51
AtmQ62388 Gm16071-201ENSMUST00000119589 793 ntBASIC11.86□□□□□ -0.51
AtmQ62388 Gm12783-201ENSMUST00000121425 397 ntBASIC11.86□□□□□ -0.51
AtmQ62388 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
AtmQ62388 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
AtmQ62388 Gm17826-201ENSMUST00000189720 798 ntBASIC11.86□□□□□ -0.51
AtmQ62388 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.86□□□□□ -0.51
AtmQ62388 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.86□□□□□ -0.51
AtmQ62388 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.86□□□□□ -0.51
AtmQ62388 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.86□□□□□ -0.51
AtmQ62388 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.86□□□□□ -0.51
AtmQ62388 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AtmQ62388 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
AtmQ62388 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.86□□□□□ -0.51
AtmQ62388 Gm9867-201ENSMUST00000192212 2647 ntBASIC11.86□□□□□ -0.51
AtmQ62388 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
AtmQ62388 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
AtmQ62388 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AtmQ62388 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.86□□□□□ -0.51
AtmQ62388 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AtmQ62388 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.86□□□□□ -0.51
AtmQ62388 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
AtmQ62388 Gm12314-201ENSMUST00000118104 538 ntBASIC11.86□□□□□ -0.51
AtmQ62388 Gm12516-201ENSMUST00000120819 385 ntBASIC11.86□□□□□ -0.51
AtmQ62388 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.86□□□□□ -0.51
AtmQ62388 Mir7677-201ENSMUST00000184226 67 ntBASIC11.86□□□□□ -0.51
AtmQ62388 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.86□□□□□ -0.51
AtmQ62388 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AtmQ62388 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
AtmQ62388 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AtmQ62388 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AtmQ62388 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
AtmQ62388 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AtmQ62388 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AtmQ62388 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
AtmQ62388 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.86□□□□□ -0.51
AtmQ62388 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
AtmQ62388 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
AtmQ62388 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
AtmQ62388 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.85□□□□□ -0.51
AtmQ62388 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
AtmQ62388 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.85□□□□□ -0.51
AtmQ62388 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AtmQ62388 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AtmQ62388 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
AtmQ62388 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.85□□□□□ -0.51
AtmQ62388 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AtmQ62388 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
AtmQ62388 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AtmQ62388 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
AtmQ62388 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AtmQ62388 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.85□□□□□ -0.51
AtmQ62388 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.85□□□□□ -0.51
AtmQ62388 Gm17831-201ENSMUST00000205579 900 ntBASIC11.85□□□□□ -0.51
AtmQ62388 Gm18460-201ENSMUST00000208088 464 ntBASIC11.85□□□□□ -0.51
AtmQ62388 Gm45856-201ENSMUST00000212752 416 ntBASIC11.85□□□□□ -0.51
AtmQ62388 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.85□□□□□ -0.51
AtmQ62388 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AtmQ62388 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AtmQ62388 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
AtmQ62388 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
AtmQ62388 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AtmQ62388 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
AtmQ62388 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
AtmQ62388 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
AtmQ62388 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
AtmQ62388 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
AtmQ62388 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
AtmQ62388 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.85□□□□□ -0.51
AtmQ62388 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
AtmQ62388 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms