Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.06□□□□□ -0.48
Sox17Q61473 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sox17Q61473 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sox17Q61473 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sox17Q61473 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Sox17Q61473 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.06□□□□□ -0.48
Sox17Q61473 Gm11594-201ENSMUST00000122313 162 ntBASIC12.06□□□□□ -0.48
Sox17Q61473 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Sox17Q61473 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.06□□□□□ -0.48
Sox17Q61473 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.06□□□□□ -0.48
Sox17Q61473 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.06□□□□□ -0.48
Sox17Q61473 Chchd1-203ENSMUST00000224633 557 ntBASIC12.06□□□□□ -0.48
Sox17Q61473 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sox17Q61473 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sox17Q61473 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sox17Q61473 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sox17Q61473 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sox17Q61473 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sox17Q61473 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.05□□□□□ -0.48
Sox17Q61473 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox17Q61473 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.05□□□□□ -0.48
Sox17Q61473 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.05□□□□□ -0.48
Sox17Q61473 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox17Q61473 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox17Q61473 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox17Q61473 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox17Q61473 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.05□□□□□ -0.48
Sox17Q61473 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Sox17Q61473 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Sox17Q61473 Gm27680-201ENSMUST00000184192 160 ntBASIC12.05□□□□□ -0.48
Sox17Q61473 Gm43094-201ENSMUST00000196549 921 ntBASIC12.05□□□□□ -0.48
Sox17Q61473 Gm5312-201ENSMUST00000203728 547 ntBASIC12.05□□□□□ -0.48
Sox17Q61473 Gm44124-201ENSMUST00000204159 472 ntBASIC12.05□□□□□ -0.48
Sox17Q61473 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.05□□□□□ -0.48
Sox17Q61473 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.05□□□□□ -0.48
Sox17Q61473 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.05□□□□□ -0.48
Sox17Q61473 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.05□□□□□ -0.48
Sox17Q61473 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox17Q61473 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.05□□□□□ -0.48
Sox17Q61473 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox17Q61473 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox17Q61473 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox17Q61473 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox17Q61473 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox17Q61473 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.05□□□□□ -0.48
Sox17Q61473 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.05□□□□□ -0.48
Sox17Q61473 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.05□□□□□ -0.48
Sox17Q61473 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox17Q61473 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sox17Q61473 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.05□□□□□ -0.48
Sox17Q61473 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox17Q61473 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sox17Q61473 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.05□□□□□ -0.48
Sox17Q61473 Map1b-203ENSMUST00000223725 2669 ntBASIC12.04□□□□□ -0.48
Sox17Q61473 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Sox17Q61473 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Sox17Q61473 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.04□□□□□ -0.48
Sox17Q61473 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Sox17Q61473 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.04□□□□□ -0.48
Sox17Q61473 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sox17Q61473 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.04□□□□□ -0.48
Sox17Q61473 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.04□□□□□ -0.48
Sox17Q61473 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sox17Q61473 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms