Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ift88Q61371 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ift88Q61371 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ift88Q61371 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ift88Q61371 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.24□□□□□ -0.13
Ift88Q61371 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Ift88Q61371 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Gm13813-201ENSMUST00000120998 787 ntBASIC14.23□□□□□ -0.13
Ift88Q61371 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ift88Q61371 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.23□□□□□ -0.13
Ift88Q61371 Gm28631-201ENSMUST00000190740 334 ntBASIC14.23□□□□□ -0.13
Ift88Q61371 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.23□□□□□ -0.13
Ift88Q61371 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.23□□□□□ -0.13
Ift88Q61371 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ift88Q61371 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Ift88Q61371 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.23□□□□□ -0.13
Ift88Q61371 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.23□□□□□ -0.13
Ift88Q61371 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ift88Q61371 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ift88Q61371 AC101945.2-201ENSMUST00000227886 1377 ntBASIC14.22□□□□□ -0.13
Ift88Q61371 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ift88Q61371 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ift88Q61371 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ift88Q61371 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ift88Q61371 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ift88Q61371 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ift88Q61371 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ift88Q61371 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ift88Q61371 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.22□□□□□ -0.13
Ift88Q61371 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.22□□□□□ -0.13
Ift88Q61371 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ift88Q61371 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ift88Q61371 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Ift88Q61371 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ift88Q61371 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.22□□□□□ -0.13
Ift88Q61371 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ift88Q61371 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ift88Q61371 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.22□□□□□ -0.13
Ift88Q61371 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.22□□□□□ -0.13
Ift88Q61371 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ift88Q61371 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Ift88Q61371 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.22□□□□□ -0.13
Ift88Q61371 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.22□□□□□ -0.13
Ift88Q61371 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ift88Q61371 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.22□□□□□ -0.13
Ift88Q61371 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ift88Q61371 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.22□□□□□ -0.13
Ift88Q61371 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Ift88Q61371 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ift88Q61371 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ift88Q61371 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ift88Q61371 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Ift88Q61371 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ift88Q61371 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ift88Q61371 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ift88Q61371 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.22□□□□□ -0.13
Ift88Q61371 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ift88Q61371 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ift88Q61371 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ift88Q61371 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ift88Q61371 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ift88Q61371 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ift88Q61371 Gm15920-201ENSMUST00000118998 402 ntBASIC14.21□□□□□ -0.13
Ift88Q61371 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ift88Q61371 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.21□□□□□ -0.13
Ift88Q61371 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ift88Q61371 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.21□□□□□ -0.13
Ift88Q61371 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ift88Q61371 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.21□□□□□ -0.13
Ift88Q61371 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.21□□□□□ -0.13
Ift88Q61371 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ift88Q61371 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ift88Q61371 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ift88Q61371 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ift88Q61371 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms