Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Six4Q61321 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Six4Q61321 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Six4Q61321 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Six4Q61321 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Six4Q61321 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.97□□□□□ -0.33
Six4Q61321 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Six4Q61321 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Six4Q61321 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.97□□□□□ -0.33
Six4Q61321 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Six4Q61321 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Six4Q61321 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Six4Q61321 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.97□□□□□ -0.33
Six4Q61321 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.97□□□□□ -0.33
Six4Q61321 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Six4Q61321 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Gm3890-201ENSMUST00000182416 207 ntBASIC12.97□□□□□ -0.33
Six4Q61321 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.97□□□□□ -0.33
Six4Q61321 Gm37424-201ENSMUST00000191727 561 ntBASIC12.97□□□□□ -0.33
Six4Q61321 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.97□□□□□ -0.33
Six4Q61321 Gm38092-201ENSMUST00000195600 653 ntBASIC12.97□□□□□ -0.33
Six4Q61321 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.97□□□□□ -0.33
Six4Q61321 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
Six4Q61321 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Six4Q61321 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Six4Q61321 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Six4Q61321 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Six4Q61321 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Six4Q61321 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Six4Q61321 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Six4Q61321 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Six4Q61321 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Six4Q61321 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Six4Q61321 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Six4Q61321 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Six4Q61321 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Six4Q61321 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Six4Q61321 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Six4Q61321 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.96□□□□□ -0.33
Six4Q61321 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Six4Q61321 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.96□□□□□ -0.33
Six4Q61321 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.96□□□□□ -0.33
Six4Q61321 Gm5187-201ENSMUST00000117317 991 ntBASIC12.96□□□□□ -0.33
Six4Q61321 Gm12957-201ENSMUST00000117835 377 ntBASIC12.96□□□□□ -0.33
Six4Q61321 Gm14921-201ENSMUST00000118643 908 ntBASIC12.96□□□□□ -0.33
Six4Q61321 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Six4Q61321 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.96□□□□□ -0.33
Six4Q61321 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.96□□□□□ -0.33
Six4Q61321 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.96□□□□□ -0.33
Six4Q61321 Gm16296-201ENSMUST00000159905 325 ntBASIC12.96□□□□□ -0.33
Six4Q61321 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Six4Q61321 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Six4Q61321 Gm5370-201ENSMUST00000187187 574 ntBASIC12.96□□□□□ -0.33
Six4Q61321 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.96□□□□□ -0.33
Six4Q61321 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Six4Q61321 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Six4Q61321 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.96□□□□□ -0.33
Six4Q61321 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Six4Q61321 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Six4Q61321 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.96□□□□□ -0.33
Six4Q61321 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Six4Q61321 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms