Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.38□□□□□ -0.43
ClpbQ60649 Gm40466-201ENSMUST00000212174 422 ntBASIC12.38□□□□□ -0.43
ClpbQ60649 Gm29705-201ENSMUST00000212598 474 ntBASIC12.38□□□□□ -0.43
ClpbQ60649 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClpbQ60649 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.38□□□□□ -0.43
ClpbQ60649 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.38□□□□□ -0.43
ClpbQ60649 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.38□□□□□ -0.43
ClpbQ60649 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClpbQ60649 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
ClpbQ60649 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
ClpbQ60649 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClpbQ60649 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClpbQ60649 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClpbQ60649 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClpbQ60649 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClpbQ60649 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClpbQ60649 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClpbQ60649 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.38□□□□□ -0.43
ClpbQ60649 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.38□□□□□ -0.43
ClpbQ60649 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClpbQ60649 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClpbQ60649 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClpbQ60649 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.38□□□□□ -0.43
ClpbQ60649 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClpbQ60649 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.37□□□□□ -0.43
ClpbQ60649 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.37□□□□□ -0.43
ClpbQ60649 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClpbQ60649 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClpbQ60649 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClpbQ60649 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClpbQ60649 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
ClpbQ60649 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClpbQ60649 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClpbQ60649 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClpbQ60649 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
ClpbQ60649 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ClpbQ60649 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ClpbQ60649 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.37□□□□□ -0.43
ClpbQ60649 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.37□□□□□ -0.43
ClpbQ60649 Gm11618-201ENSMUST00000117946 267 ntBASIC12.37□□□□□ -0.43
ClpbQ60649 Gm12203-201ENSMUST00000118235 598 ntBASIC12.37□□□□□ -0.43
ClpbQ60649 Gm12209-201ENSMUST00000120089 596 ntBASIC12.37□□□□□ -0.43
ClpbQ60649 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClpbQ60649 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
ClpbQ60649 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.37□□□□□ -0.43
ClpbQ60649 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClpbQ60649 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClpbQ60649 Gm27331-201ENSMUST00000183705 60 ntBASIC12.37□□□□□ -0.43
ClpbQ60649 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.37□□□□□ -0.43
ClpbQ60649 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.37□□□□□ -0.43
ClpbQ60649 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.37□□□□□ -0.43
ClpbQ60649 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClpbQ60649 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClpbQ60649 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClpbQ60649 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClpbQ60649 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClpbQ60649 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClpbQ60649 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.37□□□□□ -0.43
ClpbQ60649 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
ClpbQ60649 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
ClpbQ60649 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.37□□□□□ -0.43
ClpbQ60649 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ClpbQ60649 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.37□□□□□ -0.43
ClpbQ60649 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ClpbQ60649 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ClpbQ60649 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ClpbQ60649 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ClpbQ60649 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.36□□□□□ -0.43
ClpbQ60649 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
ClpbQ60649 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Gm14350-201ENSMUST00000116642 640 ntBASIC12.36□□□□□ -0.43
ClpbQ60649 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Gm14660-201ENSMUST00000119809 575 ntBASIC12.36□□□□□ -0.43
ClpbQ60649 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Snora78-201ENSMUST00000158630 128 ntBASIC12.36□□□□□ -0.43
ClpbQ60649 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.36□□□□□ -0.43
ClpbQ60649 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Gm37922-201ENSMUST00000195596 455 ntBASIC12.36□□□□□ -0.43
ClpbQ60649 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.36□□□□□ -0.43
ClpbQ60649 Gm9899-201ENSMUST00000065519 555 ntBASIC12.36□□□□□ -0.43
ClpbQ60649 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.36□□□□□ -0.43
ClpbQ60649 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
ClpbQ60649 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms