Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm13616-201ENSMUST00000120600 222 ntBASIC12.29□□□□□ -0.44
Nr1h4Q60641 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.29□□□□□ -0.44
Nr1h4Q60641 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.29□□□□□ -0.44
Nr1h4Q60641 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.29□□□□□ -0.44
Nr1h4Q60641 Gm26315-201ENSMUST00000083890 321 ntBASIC12.29□□□□□ -0.44
Nr1h4Q60641 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nr1h4Q60641 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.29□□□□□ -0.44
Nr1h4Q60641 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nr1h4Q60641 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nr1h4Q60641 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
Nr1h4Q60641 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nr1h4Q60641 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.28□□□□□ -0.44
Nr1h4Q60641 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nr1h4Q60641 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nr1h4Q60641 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nr1h4Q60641 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nr1h4Q60641 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.28□□□□□ -0.44
Nr1h4Q60641 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nr1h4Q60641 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nr1h4Q60641 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.28□□□□□ -0.44
Nr1h4Q60641 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.28□□□□□ -0.44
Nr1h4Q60641 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nr1h4Q60641 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nr1h4Q60641 Gm9797-201ENSMUST00000052902 613 ntBASIC12.28□□□□□ -0.44
Nr1h4Q60641 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nr1h4Q60641 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nr1h4Q60641 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.28□□□□□ -0.44
Nr1h4Q60641 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nr1h4Q60641 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nr1h4Q60641 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nr1h4Q60641 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nr1h4Q60641 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nr1h4Q60641 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nr1h4Q60641 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.28□□□□□ -0.44
Nr1h4Q60641 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nr1h4Q60641 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nr1h4Q60641 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Nr1h4Q60641 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nr1h4Q60641 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nr1h4Q60641 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nr1h4Q60641 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nr1h4Q60641 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nr1h4Q60641 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nr1h4Q60641 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nr1h4Q60641 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nr1h4Q60641 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nr1h4Q60641 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nr1h4Q60641 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nr1h4Q60641 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.27□□□□□ -0.45
Nr1h4Q60641 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nr1h4Q60641 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Nr1h4Q60641 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nr1h4Q60641 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nr1h4Q60641 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nr1h4Q60641 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nr1h4Q60641 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.27□□□□□ -0.45
Nr1h4Q60641 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nr1h4Q60641 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nr1h4Q60641 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.27□□□□□ -0.45
Nr1h4Q60641 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Nr1h4Q60641 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nr1h4Q60641 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nr1h4Q60641 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nr1h4Q60641 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.27□□□□□ -0.45
Nr1h4Q60641 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nr1h4Q60641 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.27□□□□□ -0.45
Nr1h4Q60641 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nr1h4Q60641 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Nr1h4Q60641 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Nr1h4Q60641 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nr1h4Q60641 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Nr1h4Q60641 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nr1h4Q60641 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.27□□□□□ -0.45
Nr1h4Q60641 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nr1h4Q60641 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nr1h4Q60641 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nr1h4Q60641 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nr1h4Q60641 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms