Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prdm1Q60636 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prdm1Q60636 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.03■□□□□ -0
Prdm1Q60636 Gm2467-201ENSMUST00000182266 1010 ntBASIC15.03■□□□□ -0
Prdm1Q60636 Gm6981-201ENSMUST00000182467 1008 ntBASIC15.03■□□□□ -0
Prdm1Q60636 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prdm1Q60636 Gm37008-201ENSMUST00000195712 319 ntBASIC15.03■□□□□ -0
Prdm1Q60636 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prdm1Q60636 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.03■□□□□ -0
Prdm1Q60636 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prdm1Q60636 Gm9823-201ENSMUST00000051212 327 ntBASIC15.03■□□□□ -0
Prdm1Q60636 Mir339-201ENSMUST00000083659 96 ntBASIC15.03■□□□□ -0
Prdm1Q60636 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Prdm1Q60636 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prdm1Q60636 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.03■□□□□ -0
Prdm1Q60636 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Prdm1Q60636 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prdm1Q60636 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prdm1Q60636 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prdm1Q60636 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.03■□□□□ -0
Prdm1Q60636 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Prdm1Q60636 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prdm1Q60636 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prdm1Q60636 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Prdm1Q60636 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.03■□□□□ -0
Prdm1Q60636 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Prdm1Q60636 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.02■□□□□ -0
Prdm1Q60636 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.02■□□□□ -0
Prdm1Q60636 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Prdm1Q60636 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prdm1Q60636 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Prdm1Q60636 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
Prdm1Q60636 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.02■□□□□ -0
Prdm1Q60636 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prdm1Q60636 Gm12742-201ENSMUST00000117326 410 ntBASIC15.02■□□□□ -0
Prdm1Q60636 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.02■□□□□ -0
Prdm1Q60636 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC15.02■□□□□ -0
Prdm1Q60636 Gm43416-201ENSMUST00000201916 1015 ntBASIC15.02■□□□□ -0
Prdm1Q60636 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.02■□□□□ -0
Prdm1Q60636 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prdm1Q60636 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prdm1Q60636 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prdm1Q60636 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.02□□□□□ -0.01
Prdm1Q60636 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Prdm1Q60636 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prdm1Q60636 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prdm1Q60636 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prdm1Q60636 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Prdm1Q60636 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prdm1Q60636 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prdm1Q60636 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Prdm1Q60636 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.01□□□□□ -0.01
Prdm1Q60636 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 Gm13392-201ENSMUST00000117708 150 ntBASIC15.01□□□□□ -0.01
Prdm1Q60636 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.01□□□□□ -0.01
Prdm1Q60636 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.01□□□□□ -0.01
Prdm1Q60636 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.01□□□□□ -0.01
Prdm1Q60636 Gm27572-201ENSMUST00000183702 255 ntBASIC15.01□□□□□ -0.01
Prdm1Q60636 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.01□□□□□ -0.01
Prdm1Q60636 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.01□□□□□ -0.01
Prdm1Q60636 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 n-R5s195-201ENSMUST00000082891 119 ntBASIC15.01□□□□□ -0.01
Prdm1Q60636 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.01□□□□□ -0.01
Prdm1Q60636 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.01□□□□□ -0.01
Prdm1Q60636 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.01□□□□□ -0.01
Prdm1Q60636 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm1Q60636 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prdm1Q60636 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Prdm1Q60636 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Prdm1Q60636 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prdm1Q60636 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15□□□□□ -0.01
Prdm1Q60636 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15□□□□□ -0.01
Prdm1Q60636 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Prdm1Q60636 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prdm1Q60636 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prdm1Q60636 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Prdm1Q60636 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prdm1Q60636 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prdm1Q60636 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC15□□□□□ -0.01
Prdm1Q60636 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms