Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm5264-201ENSMUST00000190584 848 ntBASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm17795-201ENSMUST00000214505 757 ntBASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm12485-201ENSMUST00000119641 291 ntBASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm43703-201ENSMUST00000200523 763 ntBASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 AC140397.2-201ENSMUST00000224213 834 ntBASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms