Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm12948-201ENSMUST00000119406 682 ntBASIC22.31■■□□□ 1.16
Trim41Q5NCC3 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC22.31■■□□□ 1.16
Trim41Q5NCC3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trim41Q5NCC3 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trim41Q5NCC3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trim41Q5NCC3 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC22.31■■□□□ 1.16
Trim41Q5NCC3 Gm3671-201ENSMUST00000182463 1007 ntBASIC22.31■■□□□ 1.16
Trim41Q5NCC3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC22.31■■□□□ 1.16
Trim41Q5NCC3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC22.31■■□□□ 1.16
Trim41Q5NCC3 AC159819.2-201ENSMUST00000216151 342 ntBASIC22.31■■□□□ 1.16
Trim41Q5NCC3 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC22.31■■□□□ 1.16
Trim41Q5NCC3 AC131330.1-201ENSMUST00000227814 1015 ntBASIC22.31■■□□□ 1.16
Trim41Q5NCC3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim41Q5NCC3 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim41Q5NCC3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC22.31■■□□□ 1.16
Trim41Q5NCC3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim41Q5NCC3 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim41Q5NCC3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim41Q5NCC3 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
Trim41Q5NCC3 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim41Q5NCC3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim41Q5NCC3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim41Q5NCC3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim41Q5NCC3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim41Q5NCC3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Gm30238-201ENSMUST00000195528 2603 ntBASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC22.3■■□□□ 1.16
Trim41Q5NCC3 AC091458.1-201ENSMUST00000220902 1361 ntBASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Gm11930-201ENSMUST00000117788 190 ntBASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Gm26361-201ENSMUST00000158868 186 ntBASIC22.3■■□□□ 1.16
Trim41Q5NCC3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim41Q5NCC3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Gm12029-201ENSMUST00000120073 832 ntBASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Gm13665-201ENSMUST00000120830 528 ntBASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 AC163667.3-201ENSMUST00000225774 222 ntBASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Gm28386-201ENSMUST00000189147 1849 ntBASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Gm2420-202ENSMUST00000202224 2249 ntBASIC22.29■■□□□ 1.16
Trim41Q5NCC3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Gm42769-201ENSMUST00000198576 1659 ntBASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
Trim41Q5NCC3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms