Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Gm8385-201ENSMUST00000058999 643 ntBASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Gm37737-201ENSMUST00000195013 1638 ntBASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.01□□□□□ -0.01
Ddx49Q4FZF3 CU062626.3-201ENSMUST00000225522 1411 ntBASIC15□□□□□ -0.01
Ddx49Q4FZF3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ddx49Q4FZF3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx49Q4FZF3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ddx49Q4FZF3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx49Q4FZF3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx49Q4FZF3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx49Q4FZF3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC15□□□□□ -0.01
Ddx49Q4FZF3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15□□□□□ -0.01
Ddx49Q4FZF3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx49Q4FZF3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx49Q4FZF3 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx49Q4FZF3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ddx49Q4FZF3 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC15□□□□□ -0.01
Ddx49Q4FZF3 Gm23200-201ENSMUST00000104379 132 ntBASIC15□□□□□ -0.01
Ddx49Q4FZF3 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx49Q4FZF3 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx49Q4FZF3 Gm20426-201ENSMUST00000173657 440 ntBASIC15□□□□□ -0.01
Ddx49Q4FZF3 Gm3096-201ENSMUST00000185770 364 ntBASIC15□□□□□ -0.01
Ddx49Q4FZF3 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC15□□□□□ -0.01
Ddx49Q4FZF3 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC15□□□□□ -0.01
Ddx49Q4FZF3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx49Q4FZF3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx49Q4FZF3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx49Q4FZF3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx49Q4FZF3 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx49Q4FZF3 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ddx49Q4FZF3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx49Q4FZF3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ddx49Q4FZF3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Gm14704-201ENSMUST00000120300 874 ntBASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Mir7032-201ENSMUST00000185154 79 ntBASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Gm44405-201ENSMUST00000198952 126 ntBASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ddx49Q4FZF3 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ddx49Q4FZF3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx49Q4FZF3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx49Q4FZF3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ddx49Q4FZF3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx49Q4FZF3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx49Q4FZF3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx49Q4FZF3 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx49Q4FZF3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx49Q4FZF3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.98□□□□□ -0.01
Ddx49Q4FZF3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx49Q4FZF3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx49Q4FZF3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx49Q4FZF3 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC14.98□□□□□ -0.01
Ddx49Q4FZF3 Gm15782-201ENSMUST00000121073 445 ntBASIC14.98□□□□□ -0.01
Ddx49Q4FZF3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ddx49Q4FZF3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Ddx49Q4FZF3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.98□□□□□ -0.01
Ddx49Q4FZF3 Gm8712-201ENSMUST00000221090 701 ntBASIC14.98□□□□□ -0.01
Ddx49Q4FZF3 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms