Protein–RNA interactions for Protein: Q3V125

Ccdc110, Coiled-coil domain-containing protein 110, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc110Q3V125 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.71□□□□□ -0.21
Ccdc110Q3V125 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc110Q3V125 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ccdc110Q3V125 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc110Q3V125 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ccdc110Q3V125 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Ccdc110Q3V125 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc110Q3V125 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc110Q3V125 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc110Q3V125 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc110Q3V125 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc110Q3V125 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.71□□□□□ -0.22
Ccdc110Q3V125 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc110Q3V125 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc110Q3V125 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
Ccdc110Q3V125 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc110Q3V125 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc110Q3V125 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc110Q3V125 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.71□□□□□ -0.22
Ccdc110Q3V125 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc110Q3V125 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ccdc110Q3V125 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Gm4271-201ENSMUST00000174444 973 ntBASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Gm10478-201ENSMUST00000084451 396 ntBASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.7□□□□□ -0.22
Ccdc110Q3V125 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Gm6007-201ENSMUST00000208170 823 ntBASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Gm16372-201ENSMUST00000073088 450 ntBASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ccdc110Q3V125 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms