Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC9.21□□□□□ -0.93
Cks1brtQ3UNC9 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC9.21□□□□□ -0.93
Cks1brtQ3UNC9 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Cks1brtQ3UNC9 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cks1brtQ3UNC9 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC9.21□□□□□ -0.93
Cks1brtQ3UNC9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cks1brtQ3UNC9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
Cks1brtQ3UNC9 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cks1brtQ3UNC9 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cks1brtQ3UNC9 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cks1brtQ3UNC9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cks1brtQ3UNC9 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cks1brtQ3UNC9 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Cks1brtQ3UNC9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC9.21□□□□□ -0.93
Cks1brtQ3UNC9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Mir7221-201ENSMUST00000184009 72 ntBASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Gm44357-201ENSMUST00000195897 142 ntBASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Gm19658-201ENSMUST00000196231 138 ntBASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Gm44367-201ENSMUST00000196836 138 ntBASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Gm44350-201ENSMUST00000197197 138 ntBASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Gm44390-201ENSMUST00000197533 144 ntBASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Gm44313-201ENSMUST00000198018 138 ntBASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Gm44486-201ENSMUST00000198508 138 ntBASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Gm44314-201ENSMUST00000199263 138 ntBASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Gm44394-201ENSMUST00000199558 138 ntBASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Gm44484-201ENSMUST00000199873 138 ntBASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Gm44466-201ENSMUST00000200264 138 ntBASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Gm44359-201ENSMUST00000200671 138 ntBASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Thap2-203ENSMUST00000218989 527 ntBASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC9.21□□□□□ -0.94
Cks1brtQ3UNC9 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Gm43102-201ENSMUST00000201004 2324 ntBASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Gm29257-201ENSMUST00000186115 639 ntBASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 AA619741-201ENSMUST00000195095 646 ntBASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Gm3695-201ENSMUST00000087222 1009 ntBASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Mir497b-201ENSMUST00000093601 125 ntBASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Cks1brtQ3UNC9 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms