Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Gm8213-201ENSMUST00000118191 441 ntBASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Brf2Q3UAW9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Mir1894-201ENSMUST00000122802 81 ntBASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Proscos-202ENSMUST00000178990 666 ntBASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Gm17794-201ENSMUST00000220252 955 ntBASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Brf2Q3UAW9 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Gm37922-201ENSMUST00000195596 455 ntBASIC12.12□□□□□ -0.47
Brf2Q3UAW9 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Brf2Q3UAW9 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Brf2Q3UAW9 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms