Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Pck2-205ENSMUST00000226352 2784 ntBASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Gm10576-201ENSMUST00000191927 825 ntBASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Mir339-201ENSMUST00000083659 96 ntBASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cul4aQ3TCH7 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Daam2-202ENSMUST00000224595 1926 ntBASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Gm14921-201ENSMUST00000118643 908 ntBASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Gm9630-201ENSMUST00000178304 885 ntBASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.49□□□□□ -0.25
Cul4aQ3TCH7 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Gm12928-201ENSMUST00000117115 573 ntBASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cul4aQ3TCH7 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms