Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Gm14005-210ENSMUST00000225087 1413 ntBASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Gm14829-201ENSMUST00000121499 1138 ntBASIC6.6□□□□□ -1.35
Ush2AQ2QI47 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Gm30671-201ENSMUST00000214898 318 ntBASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Ush2AQ2QI47 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 AC154354.1-203ENSMUST00000225565 1364 ntBASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Mir1190-201ENSMUST00000116925 96 ntBASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Gm12774-201ENSMUST00000117881 416 ntBASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Gm26782-203ENSMUST00000227103 751 ntBASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Gm8899-201ENSMUST00000214635 1332 ntBASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Gm7572-201ENSMUST00000182616 766 ntBASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Gm8197-202ENSMUST00000193422 934 ntBASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Gm43697-201ENSMUST00000199637 2581 ntBASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Camk2g-217ENSMUST00000226630 1937 ntBASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Gm4943-201ENSMUST00000132879 424 ntBASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Gm5451-201ENSMUST00000080545 579 ntBASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
Ush2AQ2QI47 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Ush2AQ2QI47 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
Ush2AQ2QI47 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Ush2AQ2QI47 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC6.59□□□□□ -1.36
Ush2AQ2QI47 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC6.59□□□□□ -1.36
Ush2AQ2QI47 Gm11191-201ENSMUST00000117231 610 ntBASIC6.59□□□□□ -1.36
Ush2AQ2QI47 Gm9673-201ENSMUST00000119287 781 ntBASIC6.59□□□□□ -1.36
Ush2AQ2QI47 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC6.59□□□□□ -1.36
Ush2AQ2QI47 AC103672.1-201ENSMUST00000227502 365 ntBASIC6.59□□□□□ -1.36
Ush2AQ2QI47 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Ush2AQ2QI47 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms